{ "_id": "6abcd72499f7aa8c6aa4cad8", "Package": "MSbox", "Type": "Package", "Title": "Mass Spectrometry Tools", "Version": "1.4.8", "Author": "Yonghui Dong", "Maintainer": "Yonghui Dong ", "Description": "Common mass spectrometry tools described in John Roboz\n(2013) . It allows checking element\nisotopes, calculating (isotope labelled) exact monoisitopic\nmass, m/z values and mass accuracy, and inspecting possible\ncontaminant mass peaks, examining possible adducts in\nelectrospray ionization (ESI) and matrix-assisted laser\ndesorption ionization (MALDI) ion sources.", "License": "GPL-2", "URL": "https://github.com/YonghuiDong/MSbox", "BugReports": "https://github.com/YonghuiDong/MSbox/issues/new", "Encoding": "UTF-8", "RoxygenNote": "7.2.2", "Config/pak/sysreqs": "libicu-dev libxml2-dev", "Repository": "https://yonghuidong.r-universe.dev", "Date/Publication": "2022-12-08 14:29:35 UTC", "RemoteUrl": "https://github.com/yonghuidong/msbox", "RemoteRef": "HEAD", "RemoteSha": "615167210787ad6baa5494fa5ba03b1398547a82", "NeedsCompilation": "no", "Packaged": { "Date": "2026-09-30 09:09:00 UTC", "User": "root" }, "_user": "yonghuidong", "_type": "src", "_file": "MSbox_1.4.8.tar.gz", "_fileid": "https://r2.ropensci.org/e7de13a49ba3ce4a7596dc702e9eea141f5f0e0534ccce84570188059da609d0", "_filesize": 2896325, "_sha256": "e7de13a49ba3ce4a7596dc702e9eea141f5f0e0534ccce84570188059da609d0", "_expires": "2027-01-08T09:32:18.000Z", "_created": "2026-09-30T09:09:00.000Z", "_published": "2026-09-30T09:32:20.747Z", "_jobs": [ { "job": 109818515704, "time": 179, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "11087605679" }, { "job": 109818515644, "time": 169, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11086939344" }, { "job": 109818515715, "time": 280, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "11087694146" }, { "job": 109818515795, "time": 239, "config": "macos-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "11087619058" }, { "job": 109816868045, "time": 278, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "11087145573" }, { "job": 109818515596, "time": 138, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "11087211229" }, { "job": 109818515677, "time": 130, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "11086964028" }, { "job": 109818515634, "time": 110, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "11087120907" }, { "job": 109818515658, "time": 137, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "11087081247" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/yonghuidong/actions/runs/36693758647", "_status": "success", "_upstream": "https://github.com/yonghuidong/msbox", "_commit": { "id": "615167210787ad6baa5494fa5ba03b1398547a82", "author": "Dong ", "committer": "GitHub ", "message": "Update README.md", "time": 1670509775 }, "_maintainer": { "name": "Yonghui Dong", "email": "yonghui.dong@gmail.com", "login": "yonghuidong", "twitter": "@yonghui_dong", "description": "", "uuid": 22663189 }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "stringr", "role": "Imports" }, { "package": "crayon", "role": "Imports" }, { "package": "xml2", "role": "Imports" }, { "package": "stats", "role": "Imports" } ], "_owner": "yonghuidong", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_topics": [ "chemoinformatics", "mass-spectrometry", "metabolites", "metabolomics" ], "_stars": 1, "_contributors": [ { "user": "yonghuidong", "count": 108, "uuid": 22663189 } ], "_userbio": { "uuid": 22663189, "type": "user", "name": "Dong", "followers": 31 }, "_downloads": { "count": 354, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/MSbox" }, "_devurl": "https://github.com/yonghuidong/msbox", "_searchresults": 0, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf", "extra/MSbox.html", "extra/readme.html", "extra/readme.md" ], "_homeurl": "https://github.com/yonghuidong/msbox", "_realowner": "yonghuidong", "_cranurl": true, "_releases": [ { "version": "0.1.0", "date": "2017-08-28" }, { "version": "1.0", "date": "2017-09-27" }, { "version": "1.1", "date": "2018-03-16" }, { "version": "1.1.1", "date": "2018-07-22" }, { "version": "1.2.0", "date": "2019-02-24" }, { "version": "1.2.1", "date": "2019-07-18" }, { "version": "1.2.2", "date": "2020-08-10" }, { "version": "1.3.8", "date": "2021-02-10" }, { "version": "1.3.9", "date": "2021-04-09" }, { "version": "1.4.0", "date": "2021-05-25" }, { "version": "1.4.4", "date": "2022-02-07" }, { "version": "1.4.6", "date": "2022-02-24" }, { "version": "1.4.8", "date": "2022-12-08" } ], "_exports": [ "adduct", "contam", "describe", "doStat", "E_iso", "getCV", "getFC", "getMax", "getP", "Iso_mass", "Iso_mz", "mass", "mz", "ppm", "searchDB", "what" ], "_help": [ { "page": "adduct", "title": "Common adducts", "topics": [ "adduct" ] }, { "page": "contam", "title": "Contaminants in MS", "topics": [ "contam" ] }, { "page": "describe", "title": "Get the compound information", "topics": [ "describe" ] }, { "page": "doStat", "title": "Performing statistics", "topics": [ "doStat" ] }, { "page": "E_iso", "title": "Element isotopes", "topics": [ "E_iso" ] }, { "page": "getCV", "title": "Calculate coefficient of variation (CV)", "topics": [ "getCV" ] }, { "page": "getFC", "title": "calculate fold change", "topics": [ "getFC" ] }, { "page": "getMax", "title": "Get the sample name which has the max ion intensity", "topics": [ "getMax" ] }, { "page": "getP", "title": "get p-values", "topics": [ "getP" ] }, { "page": "Iso_mass", "title": "Isotope labelled molecular mass", "topics": [ "Iso_mass" ] }, { "page": "Iso_mz", "title": "Isotope labelled molecular mass", "topics": [ "Iso_mz" ] }, { "page": "mass", "title": "molecular mass", "topics": [ "mass" ] }, { "page": "mz", "title": "Calculate accurate mass-to-charge ratio", "topics": [ "mz" ] }, { "page": "ppm", "title": "mass accuracy", "topics": [ "ppm" ] }, { "page": "searchDB", "title": "Search in customized database", "topics": [ "searchDB" ] }, { "page": "what", "title": "search for m/z in from the idiom metabolomics database", "topics": [ "what" ] } ], "_readme": "https://github.com/yonghuidong/msbox/raw/HEAD/README.md", "_rundeps": [ "cli", "crayon", "glue", "lifecycle", "magrittr", "rlang", "stringi", "stringr", "vctrs", "xml2" ], "_score": 2.6989700043360187, "_indexed": true, "_nocasepkg": "msbox", "_universes": [ "yonghuidong" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.4.8", "date": "2026-09-30T09:11:24.000Z", "distro": "resolute", "commit": "615167210787ad6baa5494fa5ba03b1398547a82", "fileid": "https://r2.ropensci.org/ea5b06e058a775c7f042a74d333939e0616be89ad0e7746ad8144b084134897c", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/yonghuidong/actions/runs/36693758647" }, { "r": "4.6.1", "os": "linux", "version": "1.4.8", "date": "2026-09-30T09:11:22.000Z", "distro": "resolute", "commit": "615167210787ad6baa5494fa5ba03b1398547a82", "fileid": "https://r2.ropensci.org/54878650a9946da63fdbd949a9484e6c82a4c55c318610b17ca4291871cb0126", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/yonghuidong/actions/runs/36693758647" }, { "r": "4.5.3", "os": "mac", "version": "1.4.8", "date": "2026-09-30T09:29:59.000Z", "commit": "615167210787ad6baa5494fa5ba03b1398547a82", "fileid": "https://r2.ropensci.org/8bc65e8d9162a0671df45a80f2f722ede8b464bcf092b4b851537f42d5b35c0b", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/yonghuidong/actions/runs/36693758647" }, { "r": "4.6.1", "os": "mac", "version": "1.4.8", "date": "2026-09-30T09:29:13.000Z", "commit": "615167210787ad6baa5494fa5ba03b1398547a82", "fileid": "https://r2.ropensci.org/29bb2664f5b213666d55f10b7778f17369960d4a07ea43f1a72c809e9aae4056", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/yonghuidong/actions/runs/36693758647" }, { "r": "4.6.0", "os": "wasm", "version": "1.4.8", "date": "2026-09-30T09:11:27.000Z", "commit": "615167210787ad6baa5494fa5ba03b1398547a82", "fileid": "https://r2.ropensci.org/5870b4b47c20795e99c7e3ca86e0d02d94c91406d9b717e6cba71ead258c5b24", "status": "success", "buildurl": "https://github.com/r-universe/yonghuidong/actions/runs/36693758647" }, { "r": "4.7.0", "os": "win", "version": "1.4.8", "date": "2026-09-30T09:10:26.000Z", "commit": "615167210787ad6baa5494fa5ba03b1398547a82", "fileid": "https://r2.ropensci.org/900e27a528016ebe260d26088ad8e11761245e6ce1c4bec71ad6327391625a14", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/yonghuidong/actions/runs/36693758647" }, { "r": "4.5.3", "os": "win", "version": "1.4.8", "date": "2026-09-30T09:10:28.000Z", "commit": "615167210787ad6baa5494fa5ba03b1398547a82", "fileid": "https://r2.ropensci.org/09493000deec814e3f7390e988e848150b034d5eceb662feab0534648124e429", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/yonghuidong/actions/runs/36693758647" }, { "r": "4.6.1", "os": "win", "version": "1.4.8", "date": "2026-09-30T09:10:52.000Z", "commit": "615167210787ad6baa5494fa5ba03b1398547a82", "fileid": "https://r2.ropensci.org/b0bd202b018d89f12cd4ab78b8b00367ee6e5bb0c1b1835f9a57c84d83115286", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/yonghuidong/actions/runs/36693758647" } ] }